New Downy Mildew Disease Caused by Hyaloperonospora brassicae on Pak choi (Brassica rapa) in Korea

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Res. Plant Dis. 2019;25(2):98-101

Publication date (electronic) : 2019 June 30

doi : https://doi.org/10.5423/RPD.2019.25.2.98

Hyun Ju Lee¹, Jae Sung Lee², Young-Joon Choi^2,

¹ Gyeonggido Agricultural Research & Extension Services, Hwaseong 18388, Korea

² Department of Biology, Kunsan National University, Gunsan 54150, Korea

^* Corresponding author Tel: +82-63-469-4582 Fax: +82-63-469-7421 E-mail: yjchoi@kunsan.ac.kr

Received 2019 June 14; Accepted 2019 June 18.

Abstract

Downy mildew disease is caused by members of the family Peronosporaceae, the largest obligate pathogenic group of the phylum Oomycota. They infect a high number of flowering plants, ranging monoto dicotyledonous plants (Thines and Choi, 2016). Among twenty genera of this family, Hyaloperonospora consists of approximately 50 species, most of which were specialized to a particular host genus or species of the Brassicaceae and allied families (Choi et al., 2011, 2018; Göker et al., 2004, 2009; Lee et al., 2017; Voglmayr and Göker, 2011; Voglmayr et al., 2014). An infamous species Hyaloperonospora brassicae causes destructive damages on Brassica, Raphanus, and Sinapis species, including many economically relevant crops such as broccoli, cabbage, radish, rape, tatsoi, and wasabi (Channon, 1981; Dickinson and Greenhalgh, 1977; Thines and Choi, 2016; Yerkes and Shaw, 1959).

Pak choi (or Bok choy; Brassica rapa subsp. chinensis) has been cultivated as an economically important vegetable since the fifth century in Asia (Fahey, 2003). There has been an increase in the production of this crop in Korea, because it is tasty, versatile, and nutritious but also can be easily grown. In January 2019, symptoms of downy mildew disease were found on pak choi at a plastic house located in Yongin-si in Korea (37°21’15.0″N 127°14’18.3″E) (Fig. 1A). A representative herbarium specimen was preserved in the Kunsan National University Herbarium (KSNUH378). To identify the causal pathogen, morphological and molecular phylogenetic analyses were performed.

Fig. 1

Downy mildew disease caused by Hyaloperonospora brassicae on pak choi (Brassica rapa subsp. chinensis). (A, B) Downy mildew occurrence in a plastic farm. (C, D) Initial symptom with yellowish leaf spots. (E) Vein-limited spots on the upper leaf surface. (F) Whitish oomycete matrix on the lower surface. (G) Conidiophore. (H, I) Ultimate branchlets. (J, K) Conidia. Source: KSNUH378

For morphological identification, conidiophores and conidia protruding from the stomata of the infected leaves were placed on a drop of distilled water on a slide glass and covered with a cover slip. The preparate was examined under a DIC-light microscope BX53F (Olympus, Tokyo, Japan) and photographed with a DigiRetina 16M digital camera (Tucsen, Fuzhou, China). Initial downy mildew symptoms on the pak choi appeared as yellowish to green-yellowish spots on the upper surface of leaves (Fig. 1E), while conidiophores and conidia occurred densely on the corresponding lower surface (Fig. 1F). Disease incidence ranged from 20 to 30%. Conidiophores (n=50) were hyaline, 200–450 µm in length, monopodially branched in 3–5 orders, while trunks were straight to slightly curved, 100–300 µm in length, with slightly swollen basal end of 8–15 µm wide (Fig. 1G). Ultimate branchlets (n=50) were mostly inpairs, curvedsigmoid, 10–30 µm long, and displayed obtuse subtruncate tips (Fig. 1H, I). Conidia (n= 100) were broadly subglobose, whitish, and measured 21.0–28.5×20.0–25.5 µm (av. 25.2×22.86 µm) with a ratio of length to width of 1.01–1.21 (av. 1.10) (Fig. 1J, K). All morphological characteristics closely matched those of H. brassicae known on Brassica species (Choi et al., 2012; Gäumann, 1923; Hong et al., 2008).

To confirm the morphological identification, two barcode markers of oomycetes, the internal transcribed spacer (ITS) rDNA and cytochrome oxidase II (cox2) mtDNA were compared with the sequences of other Hyaloperonospora species. DNA was extracted from an infected leaf of KSNUH378, using the MagListo 5M Plant Genomic DNA Extraction Kit (Bioneer, Daejeon, Korea). PCR amplifications of ITS rDNA and cox2 mtDNA were performed as using procedures outlined by Choi et al. (2015). The amplicons were purified using an AccuPrep PCR Purification Kit (Bioneer, Daejeon, Korea) and sequenced by a DNA sequencing service (Macrogen, Seoul, Korea), with the same primers used for amplification. The resulting sequences were edited with the DNASTAR software package version 5.05 (DNASTAR, Madison, WI, USA) and deposited in GenBank (accession nos. MN065156 for ITS rDNA, MN072364 for cox2 mtDNA). In addition to the reference sequences of Hyaloperonospora species available in NCBI GenBank, they were aligned by MAFFT 7 (Katoh and Standley, 2013). In order to infer their phylogenetic relationship, minimum evolution (ME) analysis was performed in MEGA7 (Kumar et al., 2016) with the default settings, except for replacement with the Tamura-Nei model. Robustness of each tree was evaluated with 1,000 bootstrap replicates. BLASTn search revealed that the ITS sequence of the downy mildew pathogen of the pak choi is identical with those of Hyaloperonospora brassica on Brassica spp. (EU137726, JX401551, MF784705) in NCBI GenBank. Similarly, the cox2 sequence corresponds with H. brassicae on B. campestris (MF784667, MF784665, MF784666). In the phylogenetic trees for ITS rDNA (Fig. 2A) and cox2 mtDNA (Fig. 2B), the present pathogen was grouped with the sequences of H. brassicae of Brassica spp. with a high supporting value of 100 %, proving its identity as H. brassicae.

Fig. 2

Minimum evolution trees based on the internal transcribed spacer rDNA and cytochrome oxidase II mtDNA sequences. Bootstrapping values higher than 70% are given above the branches. Downy mildew pathogen of pak choi (Brassica rapa subsp. chinensis) is shown in bold. The scale bar equals the number of nucleotide substitutions per site.

Over the last 100 years, H. brassicae (formerly, Peronospora parasitica) was one of the most destructive pathogens in cultivations of Brassica plants in the world (Channon, 1981; Kluczewski and Lucas, 1983; Monot et al., 2010; Sherriff and Lucas, 1990). In Korea, this pathogen has been attributed the downy mildew diseases occurring on brown mustard, Chinese cabbage, cabbage, broccoli, and tatsoi (Choi et al., 2012; Hong et al., 2008; Shin and Choi, 2006; The Korean Society of Plant Pathology, 2004). On pak choi, the disease has been previously recorded in China, Fiji, Malaysia, Papua New Guinea (Farr and Rossman, 2019), and Japan (Chu, 1935). This is the first record of H. brassicae on pak choi in Korea. Considering the increasing demand for this crop, this disease may cause a serious risk to the cultivation of pak choi.

Conflicts of Interest

No potential conflict of interest relevant to this article was reported.

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